Innate lymphoid cells (ILCs) are among the first components of the immune system to confront certain pathogens and they have a critical function at mucosal barriers, like the bowel or the lung, where the body comes in direct contact with the environment.  

But they went undetected by researchers until just five years ago. The reason is that immune cells are found in the blood, lymph nodes, or spleen and these cells aren't there. Once they mature they directly go to tissues, such as the gut or the skin, rather than blood.And they are rare.A mouse might have 200 million lymphocytes but only a few thousand ILCs.  

A study using mouse fetal liver and adult bone marrow has discovered the progenitor cells that give rise to these innate lymphoid cells.

The researchers knew from previous work on NKT cells that innate lymphoid cells express an unusual transcription factor called PLZF during their development. So they created so-called 'reporter' mice with the gene for green fluorescent protein inserted into mouse DNA, just downstream from the PLZF gene. As a result, cells from those mice that expressed PLZF appear bright green under the microscope.

Even though green-glowing cells stand out, finding the precursors to these lymphocytes, about one in 10,000 cells, was not easy. The precursors are not in the blood, and by the time they migrate to the lungs or gut, they have already matured into ILCs. The researchers eventually found the precursors to innate lymphoid cells (ILCPs) in the liver of fetal mice and in bone marrow of adult mice.

When the team purified the ILC precursors, which still contained the GFP gene, and transferred them into mice that lacked ILCs, the precursors were able to reconstitute the three known types of innate lymphoid cells. "There were no B cells or T cells or myeloid cells, no other immune cells, just these," said study author Albert Bendelac, PhD, professor of pathology at the University of Chicago. "So we think the ILCP really is a committed precursor to innate lymphoid cells."

To confirm their finding, the researchers designed mice where PLZF gene expression was tied to the gene for diphtheria toxin. When cells expressed PLZF, they also produced the toxin, which was lethal for those cells. The result was a mouse that had a normal immune system except that it completely lacked innate lymphoid cells.

Recent studies have demonstrated the importance of ILCs. They play key roles in protecting against infection or parasites, but they also have been implicated in autoimmune disorders.

Each of the three types of innate lymphoid cells—known as ILCs 1, 2 and 3—has different properties and serves different functions. ILC1 cells help prevent viral infections and can detect and remove some cancerous cells. They are similar to natural killer (NK) cells, except that NK cells circulate in the blood and ILC1s live in the gut and the liver. ILC2s are found in the lungs where they can detect and respond to parasites, but they also can initiate an allergic reaction and mucus hyper-secretion. ILC3 cells cluster in the gut, where they help mediate interactions between the bowel and bacteria. When that balance is disturbed, they can accelerate inflammation and may play a role in inflammatory bowel disease.

"ILCs are found in the most exposed tissues," Bendelac said. "They are one of your first lines of defense. We now suspect they may also influence the ensuing adaptive immune response, priming the pump, influencing how T-helper cells respond."

"Our findings provide one more tool for understanding this complex system," Bendelac said. This will help generate "powerful new way to assess the function of innate lymphocytes."